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- FindProbe
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This
research involves designing probes for microarrays. Existing algorithms
usually select probes using the criteria of homogeneity, sensitivity, and
specificity. This project proposes to include one additional criterion,
uniformity, which further improves the quality of the probes selected. It
makes use of some smart filtering techniques to avoid redundant
computation while maintaining accuracy.
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- BAYESPROT
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- This is a protein structure
prediction server using bayesian networks.
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- GeneNet
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This project
deals with a series of experiments carried out on Gene Networks.
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CSA and SAGA program
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This deals with
experiments and practical improvements of Compressed Suffix Arrays.
Local Gapped Subforest Aligner ---
A Tool to Align two RNA Secondary Structures Locally
Similarity search using spaced seeds
The Promoter Finding
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