Refining Markov Clustering for Protein Complex Prediction by Incorporating Core-attachment Structure. Sriganesh Srihari*, Kang Ning, and Hon Wai Leong, The 20th International Conference on Genome Informatics (GIW-2009), Yokohama, JAPAN, (14-16 Dec 2009), [GIW-2009]
Gene Team Tree: A Hierarchical Representation of Gene Teams of All Gap Lengths. Melvin Zhang and Hon Wai Leong, Journal of Computational Biology, (JCB), (accepted for publication [21-March-2009]).
Algorithms for Finding Gene Teams. Melvin Zhang and Hon Wai Leong, 4th Intl Conf on Mathematics and Statistics, Lampung, INDONESIA, (13-15 Aug 2009) (invited talk). ICOMS-2009,
Detecting Complexes from Protein Interaction Networks. Sriganesh Srihari and Hon Wai Leong, 11th Intl Conf on Molecular Systems Biology Shanghai, CHINA (21-25 Jun 2009) pp. 54-55. (ICMSB-2009),
Automatic Camera Calibration of Broadcast Tennis Video with Applications to 3D Virtual Content Insertion and Ball Detection and Tracking. Xinguo Yu, Nianjuan Jiang, Loong-Fah Cheong, Hon Wai Leong and Xin Yan, Computer Vision and Image Understanding, Vol. 113, No. 5, pp. 643-652, (May 2009). (CVIU),
Interactive Broadcast Services for Live Soccer Video Based on Instant Semantics Acquisition. Yu Xinguo, Hon Wai Leong, and Liyuan Li, Journal of Visual Communication and Image Representation, Vol. 20, No. 2, pp. 117-130, (Feb 2009). (JVCI),
Detecting Hubs and Quasi Cliques in Scale-free Networks. Sriganesh Srihari*, Hoong Kee Ng, Kang Ning, Hon Wai Leong, Intl. Conference on Pattern Recognition , (ICPR-2008), Tampa, Florida, USA (08-11 Dec 2008), pp. 1-4.
Gene Team Tree: A Compact Tree Representation of All Gene Teams. Melvin Zhang and Hon Wai Leong, RECOMB Workshop on Comparative Genomics, Paris, FRANCE, (13-15 Oct 2008), LNBI 5267, pp. 100-112. (RCG-2008),
Regulatory Genomics: Proceedings of the 3rd Annual Recomb Workshop. Edited by Hon Wai Leong, Wing-Kin Sung, Eleazar Eskin, Imperial Collage Press, (Series on Advances in Bioinformatics and Computational Biology), ISBN-13: 9781848162518, (July 2008), 144p. [RG2008]
Gene Team Tree and Its Representation (poster paper). Melvin Zhang and Hon Wai Leong, Intl. Conference on Intelligent Systems for Molecular Biology, (ISMB-2008), Toronto, CANADA, (19-23 July 2007), Poster D-17. [(ISMB-2008)]
Gene Team Tree: Visualizing all Gene Teams (invited round-table talk). Hon Wai Leong, Center for Genomics BioInformatics (CGB), Indiana University Bloomington, IN, USA (July 16 2008 @1pm). [(CGB Roundtable)]
Peptide Sequencing in Multi-Charged MS/MS Spectra (invited talk). Hon Wai Leong, Dept of Pathology, Univ of Michigan Ann Arbor, MI, USA (July 14 2008 @2pm) [(UM-Pathology)]
Gene Team Tree: Visualizing all Gene Teams (invited talk). Hon Wai Leong, School of Computer Science, Univ of Waterloo, Waterloo, Ontario, Canada (July 11 2008). [(Univ of Waterloo)]
An Instant Semantics Acquisition System of Live Soccer Video with Application to Live Event Alert and On-the-Fly Language Selection. Xinguo Yu, Xin Yan, LiYuan Li, Hon Wai Leong, ACM Intl. Conference on Image and Video Retrieval, (CIVR-2008), Niagara Falls, CANADA, (07-09 July 2008), pp. 495-504. [(CIVR-2008)]
Optimization with Graph Algorithms: VLSI Design, Logistics and Computational Biology. Hon Wai Leong, One Day Seminar in Mathematics UM 2008, Institute for Mathematical Science, University Malaya, Kuala Lumpur, Malaysia, 1 July 2008 (invited talk). [ODSM]
3D-2D Spatiotemporal Registration for Sports Motion Analysis (poster paper). RuiXuan Wang, Wee Kheng Leow, and Hon Wai Leong, IEEE-CS Intl. Conference on Computer Vision and Pattern Recognition (CVPR-2008), Anchorage, Alaska, USA, (24-26 June 2008). [CVPR-2008]
Using Indirect Protein-Protein Interactions for Protein Complex Prediction. Hon Nian Chua, Kang Ning, Wing-Kin Sung, Hon Wai Leong and Limsoon Wong, Journal of BioInformatics and Computational Biology, Vol. 6, No. 3, pp. 435-466, (June 2008).
On Preprocessing and anti-symmetry in de novo peptide sequencing: improving efficiency and accuracy. Kang Ning, Nan Ye, and Hon Wai Leong, Journal of BioInformatics and Computational Biology, Vol. 6, No. 3, pp. 467-492, (June 2008).
Two-Phase Filtering Strategy for Identification of Peptide with Post-Translational Modifications (poster paper). Kang Ning, Xia Cao, Hoong Kee Ng, Hon Wai Leong, Alexey Nesvizhskii, 56th ASMS Conference on Mass Spectrometry, Denver, Colorado, USA, (1-5 June 2008). [ASMS-2008]
The Shortest Common Supersequence: Algorithms and Applications to Synthesis of DNA Microarrays (invited lecture). Hon Wai Leong, Mathematics Department, Shanghai University, (May 22, 2008).
Gene Team Tree: Visualizing all Gene Teams (invited lecture). Hon Wai Leong, Shanghai Center for BioInformation Technology, Shanghai, China, (21 May 2008). [ link-here ]
Gene Team Tree: Visualizing all Gene Teams (invited lecture). Hon Wai Leong, CAS-MPG-PICB Academic Annual Meeting and Spring Out 2008, Suzhou, China, (17-18 May 2008). [ link-here ]
An Accurate and Efficient Algorithm for Peptide and PTM Identification by Tandem Mass Spectrometry, Kang Ning, Hoong Kee Ng, and Hon Wai Leong, The 18th International Conference on Genome Informatics, (GIW-2007), Singapore, December 2007, pp. 119-130.
Feedback Error Correction in EULER. (poster paper #35) Jia Zheng, and Hon Wai Leong, Poster Book of 18th International Conference on Genome Informatics, (GIW-2007), Singapore, December 2007, pp. 78-79.
Gene Order Phylogeny from Genomes with Unequal Content. (poster paper #75) Melvin Zhang, and Hon Wai Leong, and Guillaume Bourque, Poster Book of 18th International Conference on Genome Informatics, (GIW-2007), Singapore, Dec 2007, pp. 151-152.
A Database Search Method for Peptide Sequencing from Multi-Charge Spectra by Merging Sequence Tags. (poster paper #84) Huiyi Tan and Hon Wai Leong, Poster Book of 18th International Conference on Genome Informatics, (GIW-2007), Singapore, Dec 2007, pp. 165-166.
Consensus Based Fragmentation Characterization of Multi-charge MS/MS Spectra Using Decision Tree. (poster paper #33) Ket Fah Chong and Hon Wai Leong, Poster Book of 18th International Conference on Genome Informatics, (GIW-2007), Singapore, December 2007, pp. 74-75.
Using Multi-Charge Mass Spectra for Peptide Identification: A Tutorial (invited lecture). Hon Wai Leong, DAAD Summer School on Methods from Mathematics and Computer Science for Pattern Recognition in Biology, CAS-MPG Partner Institute for Computational Biology Shanghai, China, (30-Sept to 13-Oct 2007). [ link-here ]
Using Indirect Protein-Protein Interactions for Protein Complex Prediction. Hon Nian Chua, Kang Ning, Wing-Kin Sung, Hon Wai Leong and Limsoon Wong, Proc. 6th Annual Conference on Computational Systems Biology, (CSB-2007), San Diego, USA, August 2007, pp. 97-110.
Algorithm for Peptide Sequencing by Tandem Mass Spectrometry Based on Better Preprocess and Anti-symmetric Computational Model. Kang Ning and Hon Wai Leong, Proc. 6th Annual Conference on Computational Systems Biology, (CSB-2007), San Diego, USA, August 2007, pp. 19-30.
Peptide Sequencing from Tandem Mass Spectrometry. Hon Wai Leong, IMS Workshop on Computational Methods in Biomolecular Structures and Interaction Networks, IMS, NUS, Singapore, 30 July -- 03 Aug 2007, (invited talk).
A Merge-Decoupling Dead End Elimination Algorithm for Protein Side-Chain Conformation. Ket Fah Chong and Hon Wai Leong, International Journal on Data Mining and BioInformatics, Vol. 1, No. 4, (2007), pp. 372-388. (July 2007)
Determining Charge State for Low Resolution Tandem Mass Spectra based on Complementary Peak Pairs. Nan Ye and Hon Wai Leong, 2nd BioDM Workshop on Data Mining for Biomedical Applications (BioDM 2007), held in conjunction with the Pacific-Asia Conf. on Knowledge Discovery and Data Mining (PAKDD-2007). Nanjing, China, May 22-25, 2007.
A New Approach for Similarity Queries of Biological Sequences in Databases. Kang Ning, Hoong Kee Ng and Hon Wai Leong, Proc. Pacific-Asia Conf. on Knowledge Discovery and Data Mining (PAKDD-2007). LNCS-4426, Nanjing, China, May 22-25, 2007, pp. 728-736.
An Improved Algorithm for Error Correction in Reads for Fragment Assembly. (poster paper) Jia Zheng, Hon Wai Leong and Haixu Tang, Intl Conference on Research in Computational Molecular Biology (RECOMB-2007), San Francisco, Apr 2007.
Multi-Point Query in Large Spatial Databases. Hoong Kee Ng and Hon Wai Leong, Proc. IASTED Conf on Advances in Computer Science and Technology (ACST-2007) Phuket, Thailand, April 2-4, 2007, Acta Press: Canada, pp. 149-158.
Algorithms for Peptide Sequencing from Tandem Mass Spectrometry. Hon Wai Leong, NUS Office of Life Sciences Conference, 2007 OLS, NUS, Singapore, 05-06 Feb 2007, (invited talk).
De novo Peptide Sequencing for Mass Spectra based on Multi Charge Strong Tags K. Ning, Ket Fah Chong and Hon Wai Leong, Asia Pacific BioInformatics Conference (APBC-2007), Hong Kong, Jan 2007, pp. 287-296.
Modelling and Characterization of Multi-Charge Mass Spectra for Peptide Sequencing. Ket Fah Chong, Kang Ning, Hon Wai Leong and Pavel Pevzner, Journal of BioInformatics and Computational Biology, 4(6), pp. 1329-1352 (December 2006).
Towards a Better Solution to the Shortest Common Supersequence Problem: The Deposition and Reduction Algorithm. Kang Ning and Hon Wai Leong, BMC Bioinformatics, 2006, 7(Suppl 4):S12, (doi:10.1186/1471-2105-7-S4-S12), (December 2006).
Trajectory-based Ball Detection and Tracking in Broadcast Soccer Video. Xinguo Yu, Hon Wai Leong, ChangSheng Xu, and Qi Tian IEEE Transactions on Multimedia Vol. 8, No. 6, (Dec 2006), pp. 1164-1178.
PepSOM: An algorithm for peptide identification by tandem mass spectrometry based on SOM. Hoong Kee, Francis Ng, Kang Ning and Hon Wai Leong, Intl Conference on Genome Informatics (GIW-2006), Yokohama, Japan, (December 2006), pp. 194-205.
The Distribution and Deposition Method for the Multiple Oligo Nucleotide Arrays. Kang Ning and Hon Wai Leong, Intl Conference on Genome Informatics (GIW-2006), Yokohama, Japan, (December 2006), pp. 89-99.
Improving Performance of DNA Sequencing-by-Hybridization with Gapped-Probes via Domain Knowledge. Zong He Cai and Hon Wai Leong, Proceedings of the BioTechnology and Bioinformatics Symposium (BIOT-2006) October 2006, Provo, Utah, USA, pp. 74-82.
Finding Patterns in Biological Sequences by Longest Commom Subsequences and Shortest Common Supersequences. Kang Ning, Hoong Kee Ng, and Hon Wai Leong, IEEE 6th Symposium on Bioinformatics and Bioengineering (BIBE-2006), October 2006, Washington DC, pp. 53-60.
Towards a Better Solution to the Shortest Common Supersequence Problem: The Deposition and Reduction Algorithm. Kang Ning and Hon Wai Leong, Symposium of Computations in Bioinformatics and Bioscience (SCBB|06), in Proceedings of the International Multi-Symposium on Computer and Computational Sciences (IMSCCS-2006), Hangzhou, China, June 2006, pp. 84-90.
Improving the Performances of Proxy Cache Replacement Policies by Considering Infrequent Objects. H.W. Leong and Bo Guan Proceedings of the ACM Symposium on Applied Computing (SAC-2006) DSGC Track, Dijon, France, April 2006, pp. 791-796.
A Multi-Agent Algorithm for Vehicle Routing Problem with Time Windows. H.W. Leong and Ming Liu, Proceedings of the ACM Symposium on Applied Computing (SAC-2006) AIMS Track, Dijon, France, April 2006, pp. 106-111.
An Extension of Dead End Elimination for Protein Side-Chain Conformation using Merged-Decoupling. K.F. Chong and H.W. Leong, Proceedings of the ACM Symposium on Applied Computing (SAC-2006) BioInformatics Track, Dijon, France, April 2006, pp. 195-199.
A Database Search Algorithm for Identification of Peptides with Multiple Charges Using Tandem Mass Spectrometry Kang Ning, Ket Fah Chong, Hon Wai Leong, Workshop on Data Mining in BioInformatics (BioDM-2006), Singapore, April 2006, pp. 2-13.
De Novo Peptide Sequencing for Mass Spectra Based on Multi-Charge Strong Tags (poster paper). Kang Ning, Ket Fah Chong and Hon Wai Leong, Intl Conference on Research in Computational Molecular Biology (RECOMB-2006), Venice, Apr 2006.
The distribution and deposition method for the multiple oligo nucleotide arrays (poster paper). Kang Ning and Hon Wai Leong, Intl Conference on Research in Computational Molecular Biology (RECOMB-2006), Venice, Apr 2006.
Characterization of Multi-Charge Mass Spectra for Peptide Sequencing. K.F. Chong, K. Ning, H.W. Leong and P. Pevzner, Proceedings of the Asia Pacific BioInformatics Conference (APBC-2006), Taipei, Taiwan, Feb 2006, pp. 109-119.
Berth Allocation and Planning. (cover story) H.W. Leong, Innovation: The Magazine of Research and Technology, World Scientific, Vol. 6, No. 1, (January 2006), pp. 20-21. Web-links: article | cited here AAAI:transportation
Improved Algorithms for Low Power Multiplexor Decomposition. Shaofa Yang and Hon Wai Leong, Journal of Circuits, Systems and Computers (JCSC), World Scientific, Vol. 14, No. 6, (2005), pp. 1085-1099.
A Post Processing Method for Optimizing Synthesis Strategy for Oligonucleotide Microarrays K. Ning, K.P. Choi, H.W. Leong and L. Zhang, Nucleic Acids Research, Vol. 33, No. 17, (Sept 2005), e144.
A Gridding Hough Transform for Detecting the Straight Lines in Sports Video. X. Yu, Chee Lai Hoe, Sophie Xiao Fan Liu and H.W. Leong, Proceedings of the IEEE International Conference on Multimedia and EXPO (ICME-2005), Amsterdam, The Netherlands, July 2005, pp. 518-521.
Adaptive Control of Hybridization Noise in DNA Sequencing-by-Hybridization. H.W. Leong, F.P. Preparata, W.K. Sung and H. Willy, Journal of Bioinformatics and Computational Biology (JBCB) , Vol. 3, No. 1, (2005), pp. 79-98.
A Comparative Study of the Methods on Effective Synthesis of Oligo Nucleotides. (Poster paper) K. Ning, K.P. Choi, H.W. Leong and L. Zhang, Proceedings of the Asia Pacific BioInformatics Conference (APBC-2005), Singapore, Jan 2005.
A New Method to Prune Rotamers In Side-Chain Conformation Prediction. (Poster paper) Ket Fah Chong and H.W. Leong, Proceedings of 7th Annual Conference on Computational Genomics (CG7), 21-24 October 2004, Washington DC.
A Dynamic-Priority Based Approach to Steaming Video Over Cellular Networks. Shantanu Kumar Singh, H.W. Leong and Som Nath Chakravarty, Proceedings of International Conference on Computer Communications and Networks (ICCCN-2004), IEEE, 11-13 October 2004, Chicago, pp. 181-186.
3D Reconstruction and Enrichment of Broadcast Soccer Video. (Short paper) Xinguo Yu, H.W. Leong, Xin Yan and Tze Sen Hay, Proceedings of ACM Conference on Multimedia (ACMMM-2004) , ACM Press, 10-16 October 2004, New York, pp. 260-263.
A Robust and Accumulator-Free Ellipse Hough Transform. (Short paper) Xinguo Yu, H.W. Leong, ChangSheng Xu and Qi Tian, Proceedings of ACM Conference on Multimedia (ACMMM-2004) , ACM Press, 10-16 October 2004, New York, pp. 256-259.
Least-Cost Path in Public Transportation Systems with Fare Rebates that are Path- and Time-Dependent. Jinsong Tan and H.W. Leong, Proceedings of International Intelligent Transportation Systems Conference (ITSC-2004), IEEE Press, 3-6 October 2004, Washington DC, pp. 1000-1005.
Improved Algorithms for Low Power Multiplexor Decomposition. Shaofa Yang and H.W. Leong, Proceedings of International Symposium on Integrated Circuits (ISIC-2004) , IEEE, 8-10 September 2004, Singapore.
New Approximation Algorithms for Some Dynamic Storage Allocation Problems. Shuai Cheng Li, H.W. Leong and S.K. Quek Proceedings of International Computing and Combinatorics Conference (COCOON-2004) , 17-20 August 2004, Jeju Island, South Korea, pp. 339-348.
Efficient Algorithm for Path-based Range Query in Spatial Databases. Francis H.K. Ng, H W Leong and Ngai Lam Ho, Proceedings of International Database Engineering and Applications Symposium (IDEAS-2004) , IEEE, 7-9 July 2004, Coimbra, Portugal, pp. 334-343.
A Robust Hough-based Algorithm for Partial Ellipse Detection in Broadcast Soccer Video. Xinguo Yu, H.W. Leong, ChangSheng Xu and Tian Qi, Proceedings of the IEEE International Conference on Multimedia and EXPO (ICME-2004), Taipei, Taiwan, 27-30 June 2004, pp. 1555-1558.
On Path-dependent Shortest Path and its Application in Multi-modal Public Transportation Networks (Abstract+Presentation) Jinsong Tan and H W Leong, Proceedings of Optimization Days, (OptDays-2004) , 10-12 May 2004, Montreal, Canada.
Path-based Range Query Processing Using Sorted Path and Rectangle Intersection Approach. Francis H.K. Ng and H W Leong, Proceedings of International Conference for Database Systems for Advanced Applications (DASFAA-2004) , 17-19 March 2004, Jeju Island, South Korea, pp. 184-189, LNCS, 2973, Springer-Verlag, 2004.
A New Approach to Streaming Video Over Cellular Networks. (Poster paper) Shantanu Kumar Singh and H W Leong, Proceedings of Workshop on Mobile, Wireless and Sensor Networks (MobWiser-2004) , 5-6 March 2004, Singapore.
Team Possession Analysis for Broadcast Soccer Video based on Ball Trajectory. Yu, Xinguo and H W Leong, Pacific-Rim International Conference on Multimedia, (PRICOM-2003) , IEEE, Singapore, 15-18 December 2003, pp. 1811-1815.
Trajectory-based Ball Dectection and Tracking with Applications to Semantic Analysis of Broadcast Soccer Video. Xinguo Yu, Changsheng Xu, H.W. Leong, Qi Tian, Qing Tang and Kong Wah Wan, Proceedings of ACM Conference on Multimedia (ACMMM-2003) , ACM Press, 2-8 November 2004, Berkeley, pp. 11-20.
An Accurate Ball Detection and Tracking System for Broadcast Soccer Video. (Demo?) Xinguo Yu, Kong Wah Wan, ChangSheng Xu and Tian Qi and H.W. Leong, Proceedings of the IEEE International Conference on Multimedia and EXPO (ICME-2003), Baltimore, 6-9 June 2003.
A Ball Tracking Framework for Broadcast Soccer Video. Xinguo Yu, ChangSheng Xu and Qi Tian and H.W. Leong, Proceedings of the IEEE International Conference on Multimedia and EXPO (ICME-2003), Baltimore, 6-9 June 2003, pp. 265-268.
On the Control of Hybridization Noise in DNA Sequencing-by-Hybridization. H.W. Leong, F.P. Preparata, W.K. Sung and H. Willy, Proceedings of International Workshop on Algorithms in BioInformatics, (WABI-2002) , September 2002, Rome, Italy, LNCS 2452, pp. 392-403.
A Multi-Agent Based Approach to the Inventory Routing Problem. Yizhi Lao and H.W. Leong, Proceedings of Pacific-Rim International Conference on Artificial Intelligence, (PRICAI-2004) , 18-22 August 2002, Tokyo, Japan, LNAI 2417, pp. 345-354.