Recent Publications and Talks (Hon Wai Leong)

To Appear...

Sriganesh Srihari and Hon Wai Leong, "A Survey of Computational Methods for Protein Complex Prediction from Protein Interaction Networks," accepted for publication at Journal of BioInformatics and Computational Biology, (submitted: 08-Jun-2012; accepted 25-Aug-2012)

Xiao Hang, Melvin Zhang, Axel Moisg and Hon Wai Leong, "Dynamic Programming Algorithms for Efficiently Computing Cosegmentations between Biological Images," Algorithms for Molecular Biology (AlMoB), (Special Issue on WABI-2011), (accepted for publication, April 2012)

2013

Xinguo Yu, Tie Rong, Lin Li and Hon Wai Leong, "A Novel and Robust System for Time Recognition of the Digital Video Clock Using the Domain Knowledge," Proceedings of 19th Intl Conf on Multimedia Modelling, (MMM), Jan 2013, Huangshan, China, pp. 318-326. (LNCS 7732, Springer 2013, ISBN 978-3-642-35724-4,978-3-642-35725-1)

2012

Sriganesh Srihari and Hon Wai Leong, "Temporal Dynamics of Protein Complexes in PPI Networks: A Case Study using Yeast Cell Cycle Dynamics," BMC Bioinformatics, 13(Suppl 17):S16, Dec 2012.
doi:10.1186/1471-2105-13-S17-S16

Ket Fah Chong and Hon Wai Leong, "Tutorial On DeNovo Peptide Sequencing Using MS/MS Mass Spectrometry," Journal of BioInformatics and Computational Biology, Vol. 10, No. 6 (2012) 1231002 (38 pages), Dec 2012.
Imperial College Press, doi: 10.1142/S0219720012310026

Wee Kheng Leow, RuiXuan Wang, Hon Wai Leong, "3-D-2-D SpatioTemporal Registration for Sports Motion Analysis," Intl Journal of Machine Vision and Applications, 23(6), Nov 2012, pages 1177-1194.
DOI:10.1007/s00138-011-0371-7

Sriganesh Srihari and Hon Wai Leong, "A Tutorial on Computational Methods for Protein Complex Prediction from Protein Interaction Networks," (3 hour Pre-Conference Tutorial), International Conference on Bioinformatics, (InCoB-2012), Centara Grand Hotel, Bangkok, THAILAND (02-05 Oct 2012). [ InCoB-2012) ]

Kai Zhang, Ying Zhai, Hon Wai Leong, Shengming Wang, "An Interaction Educational Computer Game Framework using Hand Gesture Recognition," The 4th International Conference on Internet Multimedia Computing and Service, (ICIMCS '12), Wuhan, China, Sep 2012, pp. 219-222.

Sriganesh Srihari, and Hon Wai Leong (2012), "Employing functional interactions for characterisation and detection of sparse complexes from yeast PPI networks", Int. J. Bioinformatics Research and Applications, Vol. 8, Nos. 3/4, pp.286-304 (Sep 2012).
doi:10.1504/IJBRA.2012.048962 [ IJBRA-link ]

Melvin Zhang and Hon Wai Leong, "BBH-LS: An Algorithm for Computing Positional Homologs Using Sequence and Gene Context Similarities," BMC Systems Biology, Vol. 6(Supp 1):S22, (11 pages), July 2012.
url: http://www.biomedcentral.com/1752-0509/6/S1/S22 (Special Issue on ISB-2011),
doi:10.1186/1752-0509-6-S1-S22

Hon Wai Leong, [Keynote Lecture], "Detecting Protein Complexes from Large-Scale Protein-Protein Interaction Networks," International Conference on Mathematical Applications in Engineering, (ICMAE-2012), Seri Pacific Hotel, Kuala Lumpur, MALAYSIA, 03-05 Jul 2012, p136.
[ ICMAE-link ]

Zhong Zhou, Melvin Zhang, FanChang Hao and Hon Wai Leong, "On Two Variations of the Reversal Median Problem," International Journal of Modern Physics: Conference Series, Vol. 9, No. 1, (2012), pp. 285-292, World Scientific Publ. Co. (May 2012).
[ IJMPCS-link ] [ DOI: 10.1142/S2010194512005338 ]

Sriganesh Srihari and Hon Wai Leong, "A Survey of Algorithms for Detecting Protein Complexes from Protein-Protein Interaction Networks," Asian Association for Algorithms and Computation, (AAAC-2012), Fudan University, Shanghai, CHINA, 21-22 April 2012, p29.
[ AAAC-2012 ]

Hon Wai Leong, "Computational Methods for Detecting Protein Complexes from Protein-Protein Interaction Networks," [invited talk], Workshop on Engineering/Information Science for Integrated Life Science and Predictive Medicine, 27-28 February 2012, Singapore, p20.

Sriganesh Srihari and Hon Wai Leong, "Employing functional interactions for characterization and detection of sparse complexes from yeast PPI networks," Asia-Pacific Bioinformatics Conference, APBC-2012, Rydges Melbourne Hotel, Melbourne, 17-19 Jan 2012.
| [ APBC-2012 ]

2011

Kang Ning, Hoong Kee Ng and Hon Wai Leong, "Analysis of the Relationships among Longest Common Subsequences, Shortest Common Supersequences and Patterns and its application on Pattern Discovery in Biological Sequences," International Journal on Data Mining and BioInformatics, Vol. 5, No. 6, (2011), pp. 611-625, (Dec 2011). [ IJDMB-link ]

Sriganesh Srihari and Hon Wai Leong, "Reusability" of 'static' protein complex components during the yeast cell cycle," (poster paper) International Conference on Bioinformatics 2011, (InCoB-2011), Kuala Lumpur, MALAYSIA (30 Nov -- 02 Dec 2011). [ InCoB-2011) ]

Hon Wai Leong, "Detection of Sparse Complexes from Yeast PPI networks," (invited talk), ISDSB, Intl. Symp. on Developmental Systems Biology , CAS-MPG Partners Institute for Computational Biology (PICB), Shanghai, CHINA (12-15 Oct 2011), p13.

Xiao Hang, Melvin Zhang, Axel Mosig, Hon Wai Leong, "Dynamic Programming Algorithms for Efficiently Computing Cosegmentations between Biological Images," to appear in T.M. Przytycka and M.-F. Sagot (Eds.): WABI 2011, LNBI 6833, pp. 339--350. Springer, Heidelberg (2011). Workshop on Bioinformatics Algorithms 2011, Saarbrucken, GERMANY (05-07 Sep 2011). [ doi: 10.1007/978-3-642-23038-7_28 ] [ WABI-2011) ]

Melvin Zhang and Hon Wai Leong, "Identifying Positional Homologs as Bidirectional Best Hits of Sequence and Gene Context Similarity," 2011 IEEE Conference on Systems Biology (ISB), pp. 117-122, Zhuhai, CHINA (02-04 Sep 2011). [ doi: 10.1109/ISB.2011.6033141 ] [ ISB-2011) ]

Hon Wai Leong, "Algorithms for Analysis of PPI Networks," (invited talk), East China Normal University, Shanghai, CHINA (29 Jun 2011).

Hon Wai Leong, "Algorithms for Analysis of PPI Networks," (invited talk), Qingdao Institute for BioEnergy and BioProcess Technology (QIBEBT) Qingdao, CHINA (20 Jun 2011).

Hon Wai Leong, "Algorithms for Conserved Gene Cluster Discovery," (invited talk), Shandong University, Jinan, CHINA (16 Jun 2011).

Trong Dao Le, Melvin Zhang and Hon Wai Leong, "Algorithms for Computing Bidirectional Best Hit r-Window Gene Clusters," LNCS 6681, pp. 275-286, (2011). FAW-AAIM-2001. [ doi: 10.1007/978-3-642-21204-8_30 ] [ FAW-2011) ]

Hon Wai Leong, "Algorithms for Analysis of PPI Networks," (invited talk), Center for Systems Biology, SooChow University, Suzhou, CHINA (27 May 2011).

Hon Wai Leong, "Algorithms for Conserved Gene Cluster Discovery," (invited talk), Center for Systems Biology, SooChow University, Suzhou, CHINA (27 May 2011).

Hon Wai Leong, "Algorithms for Conserved Gene Cluster Discovery," (seminar talk), Theoretical Computer Science Monthly Seminar Series (May 2011), presented in Xi'an JiaoTong-Liverpool University, Suzhou, CHINA (26 May 2011).

Hon Wai Leong, "Algorithms for Conserved Gene Cluster Discovery," (invited talk), East China Normal University, Shanghai, CHINA (24 May 2011).

HuiYi Tan and Hon Wai Leong, "A Parent Mass Filter Algorithm for Peptide Sequencing from Tandem Mass Spectra," Proceedings of 5th IEEE Intl. Conf. on Bioinformatics and Biomedical Engineering, (ICBBE-2011), WuHan, CHINA (10-12 May 2011), 4 pages, IEEE Xplore, [ doi: 10.1109/icbbe.2011.5780091 ] [ ICBBE-2011 ]

Hon Wai Leong, "ct3d: An Algorithmic Approach for Cell Tracking in Time-Lapsed 3D Microscopy Images," Proceedings of 174th Eastern Forum of Science and Technology, "Confronting the Complexity of Cancer: A Systems Biology Disease" Shanghai, CHINA (09-10 May 2011), pp. 31-32.

Melvin Zhang and Hon Wai Leong, "Survey of Algorithms for Conserved Gene Cluster Discovery," Proceedings of 4th Annual Meeting of Asian Association for Algorithms and Computation (AAAC-2011) NTHU, Hsinchu, TAIWAN (16-17 April 2011), p23. [ AAAC-2011 ]

Zhong Zhou, Melvin Zhang, FanChang Hao and Hon Wai Leong, "On Two Variations of the Reversal Median Problem," Intl. Journal of Modern Physics: Conference Series (IJMPCS), Vol. 1, No. 1, (2011). Intl. Conf. on Mathematical and Computational Biology (ICMCB-2011) Melaka, MALAYSIA (12-14 April 2011). [ IJMPCS ] [ ICMCB-2011 ]

Ket Fah Chong and Hon Wai Leong, "MCPS: A Mono-Chromatic Peptide Sequencer for Multi-Charged Mass Spectra," (poster paper), Proceedings of RECOMB Satellite Conference on Computational Proteomics, RECOMB-CP-2011, San Diego, USA, (11-13 Mar 2011). [ RECOMB-CP-2011 ]

2010

Melvin Zhang, FanChang Hao and Hon Wai Leong, "Phylogeny from Gene Order (PGO): an integrated system for comparing phylogenetic reconstruction algorithms," 21st Annual Intl. Conf. on Genome Informatics, HangZhou, CHINA, (16-18 Dec 2010). [ GIW-2010 ]
Hon Wai Leong, "PGO: Phylogeny from Gene Order," (seminar talk), Partners Institute and Key Lab for Computational Biology, SIBS, CAS, Shanghai, China, (13 Dec 2010).
Kang Ning, Hoong Kee Ng, Sriganesh Srihari, Hon Wai Leong and Alexey I Nesvizhskii, "Examination of the Relationship between Essential Genes in PPI Network and Hub Proteins in Reverse Nearest Neighbor Topology," BMC Bioinformatics Vol. 11:505 (12 Oct 2010). [ doi:10.1186/1471-2105-11-505 ] [ paper (at BMC) ]
Sriganesh Srihari, Kang Ning and Hon Wai Leong, "MCL-CAw: A refinement of MCL for detecting yeast complexes from weighted PPI networks by incorporating core-attachment structure," BMC Bioinformatics, Vol. 11:504 (12 Oct 2010). doi:10.1186/1471-2105-11-504 [ paper (at BMC) ]
Kang Ning and Hon Wai Leong, "The Distribution and Deposition Algorithms for Multiple Sequences Sets Problem," Journal of Combinatorial Optimization, (May 2010) [ DOI: 10.1007/s10878-010-9329-3 ] [ paper at JCO ] (SCI impact factor 0.87, premium in Combinatorics)
Hoong Kee Ng, Kang Ning and Hon Wai Leong, "Two-phase Filtering Strategy for Efficient Peptide Identification from Mass Spectrometry," Journal of Proteomics Bioinformatics, Vol. 3, pp. 121-129. (April 2010). [ doi: 10.4172/jpb.1000130 ] [ paper at JPB ]
Hon Wai Leong, "Detecting Protein Complexes from Protein-Protein Interaction Networks," (seminar talk). Shanghai Center for BioInformation Technology, Shanghai, China, (25 Mar 2010).
Hon Wai Leong, "Spatial Gene Clusters: Two Models and Applications," International Conference on Mathematics, Evolution and Development, PICB, Shanghai, CHINA, (21-28 Mar 2010) (invited talk). [ ICMED-2010 ]
Hon Wai Leong, "Spatial Gene Clusters: Two Models and Applications," (seminar talk) International Institute for Software Technology, United Nations University, Macau, China, (18 Mar 2010). [ link-here ]
Sriganesh Srihari and Hon Wai Leong, "Extending the MCL-CA Algorithm for Protein Complex Detection from Weighted PPI Networks (poster paper)," The 8^th Asia-Pacific BioInformatics Conference (APBC-2010), Bangalore, INDIA, (18-21 Jan 2010), | APBC-2010),
Melvin Zhang and Hon Wai Leong, "Bidirectional Best Hit r-Window Gene Clusters," BMC Bioinformatics 2010, 11(Suppl 1):S63 doi:10.1186/1471-2105-11-S1-S63. The 8^th Asia-Pacific BioInformatics Conference (APBC-2010), Bangalore, INDIA, (18-21 Jan 2010), | APBC-2010), | paper(pdf)

2009

Sriganesh Srihari, Kang Ning, and Hon Wai Leong, "Refining Markov Clustering for Protein Complex Prediction by Incorporating Core-attachment Structure," Genome Informatics, Vol. 23, (2009), pp. 159-166. The 20th International Conference on Genome Informatics (GIW-2009), Yokohama, JAPAN, (14-16 Dec 2009), | GIW-2009 | GI-v23 | paper (pdf).
Melvin Zhang and Hon Wai Leong, "Gene Team Tree: A Hierarchical Representation of Gene Teams of All Gap Lengths," Journal of Computational Biology, October 2009, 16(10): 1383-1398. doi:10.1089/cmb.2009.0093. (JCB),
Melvin Zhang and Hon Wai Leong, "Finding Gene Clusters," Mini-symposium on Gene Clustering Methodology, PICB, Shanghai, CHINA (03 Oct 2009) (invited talk).
Melvin Zhang and Hon Wai Leong, "Algorithms for Finding Gene Teams," 4^th Intl Conf on Mathematics and Statistics, Lampung, INDONESIA, (13-15 Aug 2009) (invited talk). ICOMS-2009,
Sriganesh Srihari and Hon Wai Leong, "Detecting Complexes from Protein Interaction Networks," 11^th Intl Conf on Molecular Systems Biology Shanghai, CHINA (21-25 Jun 2009) pp. 54-55. (ICMSB-2009),
Xinguo Yu, Nianjuan Jiang, Loong-Fah Cheong, Hon Wai Leong and Xin Yan, "Automatic Camera Calibration of Broadcast Tennis Video with Applications to 3D Virtual Content Insertion and Ball Detection and Tracking," Computer Vision and Image Understanding, Vol. 113, No. 5, pp. 643-652, (May 2009). (CVIU),
Hon Wai Leong, "Overview of the bioinformatics research in the NUS School of Computing," 2^nd Singapore-Hungary Joint Symposium on Biomedical Devices and Computational Sciences , Singapore, (23-24 Apr 2009), (invited talk). | SHJS-2009 |
Yu Xinguo, Hon Wai Leong, and Liyuan Li, "Interactive Broadcast Services for Live Soccer Video Based on Instant Semantics Acquisition," Journal of Visual Communication and Image Representation, Vol. 20, No. 2, pp. 117-130, (Feb 2009). (JVCI),

2008

Sriganesh Srihari*, Hoong Kee Ng, Kang Ning, Hon Wai Leong, "Detecting Hubs and Quasi Cliques in Scale-free Networks," Intl. Conference on Pattern Recognition , (ICPR-2008), Tampa, Florida, USA (08-11 Dec 2008), pp. 1-4.
Melvin Zhang and Hon Wai Leong, "Gene Team Tree: A Compact Tree Representation of All Gene Teams," LNBI 5267, pp. 100-112. RECOMB Workshop on Comparative Genomics, Paris, FRANCE, (13-15 Oct 2008). (RCG-2008),
Hon Wai Leong, Wing-Kin Sung, Eleazar Eskin (co-editors) Regulatory Genomics: Proceedings of the 3rd Annual Recomb Workshop Imperial Collage Press, (Series on Advances in Bioinformatics and Computational Biology), ISBN-13: 9781848162518, (July 2008), 144p. [RG2008]
Melvin Zhang and Hon Wai Leong, "Gene Team Tree and Its Representation (poster paper)," Intl. Conference on Intelligent Systems for Molecular Biology, (ISMB-2008), Toronto, CANADA, (19-23 July 2007), Poster D-17. [(ISMB-2008)]
Hon Wai Leong, "Gene Team Tree: Visualizing all Gene Teams (invited round-table talk)," Center for Genomics BioInformatics (CGB), Indiana University Bloomington, IN, USA (July 16 2008 @1pm). [(CGB Roundtable)]
Hon Wai Leong, "Peptide Sequencing in Multi-Charged MS/MS Spectra (invited talk)," Dept of Pathology, Univ of Michigan Ann Arbor, MI, USA (July 14 2008 @2pm) [(UM-Pathology)]
Hon Wai Leong, "Gene Team Tree: Visualizing all Gene Teams (invited talk)," School of Computer Science, Univ of Waterloo, Waterloo, Ontario, Canada (July 11 2008). [(Univ of Waterloo)]
Xinguo Yu, Xin Yan, LiYuan Li, Hon Wai Leong, "An Instant Semantics Acquisition System of Live Soccer Video with Application to Live Event Alert and On-the-Fly Language Selection," ACM Intl. Conference on Image and Video Retrieval, (CIVR-2008), Niagara Falls, CANADA, (07-09 July 2008), pp. 495-504. [(CIVR-2008)]
Hon Wai Leong, Optimization with Graph Algorithms: VLSI Design, Logistics and Computational Biology, (Keynote Lecture), One Day Seminar in Mathematics UM 2008, Institute for Mathematical Science, University Malaya, Kuala Lumpur, Malaysia, 1 July 2008. [ODSM]
RuiXuan Wang, Wee Kheng Leow, and Hon Wai Leong, "3D-2D Spatiotemporal Registration for Sports Motion Analysis," (poster paper), IEEE-CS Intl. Conference on Computer Vision and Pattern Recognition (CVPR-2008), Anchorage, Alaska, USA, (24-26 June 2008). [CVPR-2008]
Hon Nian Chua, Kang Ning, Wing-Kin Sung, Hon Wai Leong and Limsoon Wong, "Using Indirect Protein-Protein Interactions for Protein Complex Prediction," Journal of BioInformatics and Computational Biology, Vol. 6, No. 3, pp. 435-466, (June 2008).
Kang Ning, Nan Ye, and Hon Wai Leong, "On Preprocessing and anti-symmetry in de novo peptide sequencing: improving efficiency and accuracy," Journal of BioInformatics and Computational Biology, Vol. 6, No. 3, pp. 467-492, (June 2008).
Kang Ning, Xia Cao, Hoong Kee Ng, Hon Wai Leong, Alexey Nesvizhskii, "Two-Phase Filtering Strategy for Identification of Peptide with Post-Translational Modifications (poster paper)," 56^th ASMS Conference on Mass Spectrometry, Denver, Colorado, USA, (1-5 June 2008). [ASMS-2008]
Hon Wai Leong, "The Shortest Common Supersequence: Algorithms and Applications to Synthesis of DNA Microarrays," (invited lecture), Mathematics Department, Shanghai University, (May 22, 2008).
Hon Wai Leong, "Gene Team Tree: Visualizing all Gene Teams," (invited lecture). Shanghai Center for BioInformation Technology, Shanghai, China, (21 May 2008). [ link-here ]
Hon Wai Leong, "Gene Team Tree: Visualizing all Gene Teams," (invited lecture), CAS-MPG-PICB Academic Annual Meeting and Spring Out 2008, Suzhou, China, (17-18 May 2008). [ link-here ]

2007

Kang Ning, Hoong Kee Ng, and Hon Wai Leong, "An Accurate and Efficient Algorithm for Peptide and PTM Identification by Tandem Mass Spectrometry," The 18th International Conference on Genome Informatics, (GIW-2007), Singapore, December 2007, pp. 119-130.
Jia Zheng, and Hon Wai Leong, "Feedback Error Correction in EULER," (poster paper #35) Poster Book of 18th International Conference on Genome Informatics, (GIW-2007), Singapore, December 2007, pp. 78-79.
Melvin Zhang, and Hon Wai Leong, and Guillaume Bourque, "Gene Order Phylogeny from Genomes with Unequal Content," (poster paper #75) Poster Book of 18th International Conference on Genome Informatics, (GIW-2007), Singapore, Dec 2007, pp. 151-152.
Huiyi Tan and Hon Wai Leong, "A Database Search Method for Peptide Sequencing from Multi-Charge Spectra by Merging Sequence Tags," (poster paper #84) Poster Book of 18th International Conference on Genome Informatics, (GIW-2007), Singapore, Dec 2007, pp. 165-166.
Ket Fah Chong and Hon Wai Leong, "Consensus Based Fragmentation Characterization of Multi-charge MS/MS Spectra Using Decision Tree," (poster paper #33) Poster Book of 18th International Conference on Genome Informatics, (GIW-2007), Singapore, December 2007, pp. 74-75.
Hon Wai Leong, "Using Multi-Charge Mass Spectra for Peptide Identification: A Tutorial," (invited tutorial). DAAD Summer School on Methods from Mathematics and Computer Science for Pattern Recognition in Biology, CAS-MPG Partner Institute for Computational Biology Shanghai, China, (30-Sept to 13-Oct 2007). [ link-here ]
Hon Nian Chua, Kang Ning, Wing-Kin Sung, Hon Wai Leong and Limsoon Wong, "Using Indirect Protein-Protein Interactions for Protein Complex Prediction," Proc. 6th Annual Conference on Computational Systems Biology, (CSB-2007), San Diego, USA, August 2007, pp. 97-110.
Kang Ning and Hon Wai Leong, "Algorithm for Peptide Sequencing by Tandem Mass Spectrometry Based on Better Preprocess and Anti-symmetric Computational Model," Proc. 6th Annual Conference on Computational Systems Biology, (CSB-2007), San Diego, USA, August 2007, pp. 19-30.
Hon Wai Leong, "Peptide Sequencing from Tandem Mass Spectrometry," IMS Workshop on Computational Methods in Biomolecular Structures and Interaction Networks, IMS, NUS, Singapore, 30 July -- 03 Aug 2007, (invited talk).
Ket Fah Chong and Hon Wai Leong, "A Merge-Decoupling Dead End Elimination Algorithm for Protein Side-Chain Conformation," International Journal on Data Mining and BioInformatics, Vol. 1, No. 4, (July 2007), pp. 372-388. DOI: 10.1504/IJDMB.2007.012966
Nan Ye and Hon Wai Leong, "Determining Charge State for Low Resolution Tandem Mass Spectra based on Complementary Peak Pairs," 2nd BioDM Workshop on Data Mining for Biomedical Applications (BioDM 2007), held in conjunction with the Pacific-Asia Conf. on Knowledge Discovery and Data Mining (PAKDD-2007). Nanjing, China, May 22-25, 2007.
Kang Ning, Hoong Kee Ng and Hon Wai Leong, "A New Approach for Similarity Queries of Biological Sequences in Databases," Proc. Pacific-Asia Conf. on Knowledge Discovery and Data Mining (PAKDD-2007). LNCS-4426, Nanjing, China, May 22-25, 2007, pp. 728-736.
Jia Zheng, Hon Wai Leong and Haixu Tang, "An Improved Algorithm for Error Correction in Reads for Fragment Assembly," (poster paper) Intl Conference on Research in Computational Molecular Biology (RECOMB-2007), San Francisco, Apr 2007.
Hoong Kee Ng and Hon Wai Leong, "Multi-Point Query in Large Spatial Databases," Proc. IASTED Conf on Advances in Computer Science and Technology (ACST-2007) Phuket, Thailand, April 2-4, 2007, Acta Press: Canada, pp. 149-158.
Hon Wai Leong, "Algorithms for Peptide Sequencing from Tandem Mass Spectrometry," NUS Office of Life Sciences Conference, 2007 OLS, NUS, Singapore, 05-06 Feb 2007, (invited talk).
K. Ning, Ket Fah Chong and Hon Wai Leong, "De novo Peptide Sequencing for Mass Spectra based on Multi Charge Strong Tags," Asia Pacific BioInformatics Conference (APBC-2007), Hong Kong, Jan 2007, pp. 287-296.

2006

Ket Fah Chong, Kang Ning, Hon Wai Leong and Pavel Pevzner, "Modelling and Characterization of Multi-Charge Mass Spectra for Peptide Sequencing," Journal of BioInformatics and Computational Biology, 4(6), pp. 1329-1352 (December 2006).
Kang Ning and Hon Wai Leong, "Towards a Better Solution to the Shortest Common Supersequence Problem: The Deposition and Reduction Algorithm," BMC Bioinformatics, 2006, 7(Suppl 4):S12, (doi:10.1186/1471-2105-7-S4-S12), (December 2006).
Xinguo Yu, Hon Wai Leong, ChangSheng Xu, and Qi Tian "Trajectory-based Ball Detection and Tracking in Broadcast Soccer Video," IEEE Transactions on Multimedia Vol. 8, No. 6, (Dec 2006), pp. 1164-1178.
Hoong Kee, Francis Ng, Kang Ning and Hon Wai Leong, "PepSOM: An algorithm for peptide identification by tandem mass spectrometry based on SOM," Intl Conference on Genome Informatics (GIW-2006), Yokohama, Japan, (December 2006), pp. 194-205.
Kang Ning and Hon Wai Leong, "The Distribution and Deposition Method for the Multiple Oligo Nucleotide Arrays," Intl Conference on Genome Informatics (GIW-2006), Yokohama, Japan, (December 2006), pp. 89-99.
Zong He Cai and Hon Wai Leong, "Improving Performance of DNA Sequencing-by-Hybridization with Gapped-Probes via Domain Knowledge," Proceedings of the BioTechnology and Bioinformatics Symposium (BIOT-2006) October 2006, Provo, Utah, USA, pp. 74-82.
Kang Ning, Hoong Kee Ng, and Hon Wai Leong, "Finding Patterns in Biological Sequences by Longest Commom Subsequences and Shortest Common Supersequences," IEEE 6th Symposium on Bioinformatics and Bioengineering (BIBE-2006), October 2006, Washington DC, pp. 53-60.
Kang Ning and Hon Wai Leong, "Towards a Better Solution to the Shortest Common Supersequence Problem: The Deposition and Reduction Algorithm," Symposium of Computations in Bioinformatics and Bioscience (SCBB|06), in Proceedings of the International Multi-Symposium on Computer and Computational Sciences (IMSCCS-2006), Hangzhou, China, June 2006, pp. 84-90.
Hon Wai Leong and Bo Guan "Improving the Performances of Proxy Cache Replacement Policies by Considering Infrequent Objects," Proceedings of the ACM Symposium on Applied Computing (SAC-2006) DSGC Track, Dijon, France, April 2006, pp. 791-796.
Hon Wai Leong and Ming Liu, "A Multi-Agent Algorithm for Vehicle Routing Problem with Time Windows," Proceedings of the ACM Symposium on Applied Computing (SAC-2006) AIMS Track, Dijon, France, April 2006, pp. 106-111.
Ket Fah Chong and Hon Wai Leong, "An Extension of Dead End Elimination for Protein Side-Chain Conformation using Merged-Decoupling," Proceedings of the ACM Symposium on Applied Computing (SAC-2006) BioInformatics Track, Dijon, France, April 2006, pp. 195-199.
Kang Ning, Ket Fah Chong, Hon Wai Leong, "A Database Search Algorithm for Identification of Peptides with Multiple Charges Using Tandem Mass Spectrometry," Workshop on Data Mining in BioInformatics (BioDM-2006), Singapore, April 2006, pp. 2-13.
Kang Ning, Ket Fah Chong and Hon Wai Leong, "De Novo Peptide Sequencing for Mass Spectra Based on Multi-Charge Strong Tags (poster paper)," Intl Conference on Research in Computational Molecular Biology (RECOMB-2006), Venice, Apr 2006.
Kang Ning and Hon Wai Leong, "The distribution and deposition method for the multiple oligo nucleotide arrays," (poster paper), Intl Conference on Research in Computational Molecular Biology (RECOMB-2006), Venice, Apr 2006.
Ket Fah Chong, King Ning, Hon Wai Leong and Pavel Pevzner, "Characterization of Multi-Charge Mass Spectra for Peptide Sequencing," Proceedings of the Asia Pacific BioInformatics Conference (APBC-2006), Taipei, Taiwan, Feb 2006, pp. 109-119.
Hon Wai Leong, "Berth Allocation and Planning," (cover story), Innovation: The Magazine of Research and Technology, World Scientific, Vol. 6, No. 1, (January 2006), pp. 20-21. Web-links: article | cited here AAAI:transportation

2005

Shaofa Yang and Hon Wai Leong, "Improved Algorithms for Low Power Multiplexor Decomposition," Journal of Circuits, Systems and Computers (JCSC), World Scientific, Vol. 14, No. 6, (2005), pp. 1085-1099.
Kang Ning, Kwok Pui Choi, Hon Wai Leong and Louxin Zhang, "A Post Processing Method for Optimizing Synthesis Strategy for Oligonucleotide Microarrays," Nucleic Acids Research, Vol. 33, No. 17, (Sept 2005), e144.
X. Yu, Chee Lai Hoe, Sophie Xiao Fan Liu and H.W. Leong, "A Gridding Hough Transform for Detecting the Straight Lines in Sports Video," Proceedings of the IEEE International Conference on Multimedia and EXPO (ICME-2005), Amsterdam, The Netherlands, July 2005, pp. 518-521.
Hon Wai Leong, Franco P. Preparata, Wing Kin Sung and Hugo Willy, "Adaptive Control of Hybridization Noise in DNA Sequencing-by-Hybridization," Journal of Bioinformatics and Computational Biology (JBCB) , Vol. 3, No. 1, (2005), pp. 79-98.
Kang Ning, Kwok Pui Choi, Hon Wai Leong and Louxin Zhang, A Comparative Study of the Methods for Effective Synthesis of Oligo Nucleotides," (Poster paper) Proceedings of the Asia Pacific BioInformatics Conference (APBC-2005), Singapore, Jan 2005.

2004

Ket Fah Chong and Hon Wai Leong, "A New Method to Prune Rotamers in Side-Chain Conformation Prediction," (Poster paper) Proceedings of 7th Annual Conference on Computational Genomics (CG7), 21-24 October 2004, Washington DC.
Shantanu Kumar Singh, Hon Wai Leong and Som Nath Chakravarty, "A Dynamic-Priority Based Approach to Steaming Video Over Cellular Networks," Proceedings of International Conference on Computer Communications and Networks (ICCCN-2004), IEEE, 11-13 October 2004, Chicago, pp. 181-186.
Xinguo Yu, Hon Wai Leong, Xin Yan and Tze Sen Hay, "3D Reconstruction and Enrichment of Broadcast Soccer Video," (Short paper) Proceedings of ACM Conference on Multimedia (ACMMM-2004) , ACM Press, 10-16 October 2004, New York, pp. 260-263.
Xinguo Yu, H.W. Leong, ChangSheng Xu and Qi Tian, "A Robust and Accumulator-Free Ellipse Hough Transform," (Short paper) Proceedings of ACM Conference on Multimedia (ACMMM-2004) , ACM Press, 10-16 October 2004, New York, pp. 256-259.
Jinsong Tan and H.W. Leong, "Least-Cost Path in Public Transportation Systems with Fare Rebates that are Path- and Time-Dependent," Proceedings of International Intelligent Transportation Systems Conference (ITSC-2004), IEEE Press, 3-6 October 2004, Washington DC, pp. 1000-1005.
Shaofa Yang and H.W. Leong, "Improved Algorithms for Low Power Multiplexor Decomposition," Proceedings of International Symposium on Integrated Circuits (ISIC-2004) , IEEE, 8-10 September 2004, Singapore.
Shuai Cheng Li, H.W. Leong and S.K. Quek "New Approximation Algorithms for Some Dynamic Storage Allocation Problems," Proceedings of International Computing and Combinatorics Conference (COCOON-2004) , 17-20 August 2004, Jeju Island, South Korea, pp. 339-348.
Francis H.K. Ng, H W Leong and Ngai Lam Ho, "Efficient Algorithm for Path-based Range Query in Spatial Databases," Proceedings of International Database Engineering and Applications Symposium (IDEAS-2004) , IEEE, 7-9 July 2004, Coimbra, Portugal, pp. 334-343.
Xinguo Yu, H.W. Leong, ChangSheng Xu and Tian Qi, "A Robust Hough-based Algorithm for Partial Ellipse Detection in Broadcast Soccer Video," Proceedings of the IEEE International Conference on Multimedia and EXPO (ICME-2004), Taipei, Taiwan, 27-30 June 2004, pp. 1555-1558.
Jinsong Tan and H W Leong, "On Path-dependent Shortest Path and its Application in Multi-modal Public Transportation Networks," (Abstract+Presentation) Proceedings of Optimization Days, (OptDays-2004) , 10-12 May 2004, Montreal, Canada.
Francis H.K. Ng and H W Leong, "Path-based Range Query Processing Using Sorted Path and Rectangle Intersection Approach," Proceedings of International Conference for Database Systems for Advanced Applications (DASFAA-2004) , 17-19 March 2004, Jeju Island, South Korea, pp. 184-189, LNCS, 2973, Springer-Verlag, 2004.
Shantanu Kumar Singh and H W Leong, "A New Approach to Streaming Video Over Cellular Networks," (Poster paper) Proceedings of Workshop on Mobile, Wireless and Sensor Networks (MobWiser-2004) , 5-6 March 2004, Singapore.

2003

Yu, Xinguo and H W Leong, "Team Possession Analysis for Broadcast Soccer Video based on Ball Trajectory," Pacific-Rim International Conference on Multimedia, (PRICOM-2003) , IEEE, Singapore, 15-18 December 2003, pp. 1811-1815.
Xinguo Yu, Changsheng Xu, H.W. Leong, Qi Tian, Qing Tang and Kong Wah Wan, "Trajectory-based Ball Dectection and Tracking with Applications to Semantic Analysis of Broadcast Soccer Video," Proceedings of ACM Conference on Multimedia (ACMMM-2003) , ACM Press, 2-8 November 2004, Berkeley, pp. 11-20.
Xinguo Yu, Kong Wah Wan, ChangSheng Xu and Tian Qi and H.W. Leong, "An Accurate Ball Detection and Tracking System for Broadcast Soccer Video," (Demo) Proceedings of the IEEE International Conference on Multimedia and EXPO (ICME-2003), Baltimore, 6-9 June 2003.
Xinguo Yu, ChangSheng Xu and Qi Tian and H.W. Leong, "A Ball Tracking Framework for Broadcast Soccer Video," Proceedings of the IEEE International Conference on Multimedia and EXPO (ICME-2003), Baltimore, 6-9 June 2003, pp. 265-268.

2002

H.W. Leong, F.P. Preparata, W.K. Sung and H. Willy, "On the Control of Hybridization Noise in DNA Sequencing-by-Hybridization," Proceedings of International Workshop on Algorithms in BioInformatics, (WABI-2002) , September 2002, Rome, Italy, LNCS 2452, pp. 392-403.
Yizhi Lao and H.W. Leong, "A Multi-Agent Based Approach to the Inventory Routing Problem," Proceedings of Pacific-Rim International Conference on Artificial Intelligence, (PRICAI-2004) , 18-22 August 2002, Tokyo, Japan, LNAI 2417, pp. 345-354.

(Hon Wai Leong, May 2011)
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